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Machine Learning Summer School on Theory and Practice of Computational Learning

What Do Unique Games, Structural Biology and the Low-Rank Matrix Completion Problem Have In Common

author: Amit Singer, Department of Mathematics, Princeton University

Description

We will formulate several data-driven applications as MAX2LIN and d-to-1 games, and show how to (approximately) solve them using efficient spectral and semidefinite program relaxations. The relaxations perform incredibly well in the presence of a large number of outlier measurements that cannot be satisfied. We use random matrix theory to prove that the algorithms almost achieve the information theoretic Shannon bound. The underlying group structure of the different applications (like SO(2), SO(3), GL(n), etc.) is heavily exploited. Applications include: cryo-electron microscopy and NMR spectroscopy for 3D protein structuring, low-rank matrix completion, clock synchronization, and surface reconstruction in computer vision and optics. Partly joint with Yoel Shkolnisky, Ronald Coifman and Fred Sigworth (Yale); Mihai Cucuringu and Yaron Lipman (Princeton); and Yosi Keller (Bar Ilan).

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Slides
0:00 What do unique games, structural biology and the low-rank matrix completion problem have in common?
0:39 Outline
1:47 Sensor Network Localization and NMR Spectroscopy
4:07 Low-Rank Matrix Completion
6:08 Noise Model: Outliers
7:11 Cryo Electron Microscopy: Projection Images
9:48 Projection Images: Toy Example
10:05 E. coli ribosome: sample images
11:10 Class Averaging: Improve SNR
13:38 Current clustering method (Penczek, Zhu, Frank 1996)
15:51 Small World Graph on RP2
20:28 Max-2-Lin-mod-2
22:58 Eigenvector Method
26:07 SDP approach
27:44 The complete graph case – only for mathematical intuition
29:56 Wigner’s Semi-Circle Law
30:48 Spectral Gap
30:56 Wigner’s Semi-Circle Law
32:03 The complete graph case – only for mathematical intuition
32:17 Wigner’s Semi-Circle Law
33:17 Spectral Gap
34:03 Correlation and Regular Perturbations
34:52 Experimental Correlations
35:41 Small world graph on RP2
37:57 Spectral graph theory and spherical harmonics
38:21 Experimental Correlations
38:43 Comparison with SDP
40:10 Information Theory (1)
41:14 Information Theory (2)
43:33 Max-2-Lin-mod-L and Unique Games
46:55 Fourier projection-slice theorem
50:00 Angular Reconstitution (Van Heel, 1987)
51:04 Global Integration of Common Lines
53:09 Integral Operator on SO(3)
56:18 Convolution and Fourier Transform on SO(3)
57:35 Spectrum: Semi-Circle
58:10 Spectrum: Spherical Harmonics
58:24 Reconstruction (1)
58:37 Reconstruction (2)
58:47 Groups
59:54 Thank You!, Questions
61:24 Convolution and Fourier Transform on SO(3)

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