What Do Unique Games, Structural Biology and the Low-Rank Matrix Completion Problem Have In Common
Description
We will formulate several data-driven applications as MAX2LIN and d-to-1 games, and show how to (approximately) solve them using efficient spectral and semidefinite program relaxations. The relaxations perform incredibly well in the presence of a large number of outlier measurements that cannot be satisfied. We use random matrix theory to prove that the algorithms almost achieve the information theoretic Shannon bound. The underlying group structure of the different applications (like SO(2), SO(3), GL(n), etc.) is heavily exploited. Applications include: cryo-electron microscopy and NMR spectroscopy for 3D protein structuring, low-rank matrix completion, clock synchronization, and surface reconstruction in computer vision and optics. Partly joint with Yoel Shkolnisky, Ronald Coifman and Fred Sigworth (Yale); Mihai Cucuringu and Yaron Lipman (Princeton); and Yosi Keller (Bar Ilan).
| Slides | |
| 0:00 | What do unique games, structural biology and the low-rank matrix completion problem have in common? |
| 0:39 | Outline |
| 1:47 | Sensor Network Localization and NMR Spectroscopy |
| 4:07 | Low-Rank Matrix Completion |
| 6:08 | Noise Model: Outliers |
| 7:11 | Cryo Electron Microscopy: Projection Images |
| 9:48 | Projection Images: Toy Example |
| 10:05 | E. coli ribosome: sample images |
| 11:10 | Class Averaging: Improve SNR |
| 13:38 | Current clustering method (Penczek, Zhu, Frank 1996) |
| 15:51 | Small World Graph on RP2 |
| 20:28 | Max-2-Lin-mod-2 |
| 22:58 | Eigenvector Method |
| 26:07 | SDP approach |
| 27:44 | The complete graph case – only for mathematical intuition |
| 29:56 | Wigner’s Semi-Circle Law |
| 30:48 | Spectral Gap |
| 30:56 | Wigner’s Semi-Circle Law |
| 32:03 | The complete graph case – only for mathematical intuition |
| 32:17 | Wigner’s Semi-Circle Law |
| 33:17 | Spectral Gap |
| 34:03 | Correlation and Regular Perturbations |
| 34:52 | Experimental Correlations |
| 35:41 | Small world graph on RP2 |
| 37:57 | Spectral graph theory and spherical harmonics |
| 38:21 | Experimental Correlations |
| 38:43 | Comparison with SDP |
| 40:10 | Information Theory (1) |
| 41:14 | Information Theory (2) |
| 43:33 | Max-2-Lin-mod-L and Unique Games |
| 46:55 | Fourier projection-slice theorem |
| 50:00 | Angular Reconstitution (Van Heel, 1987) |
| 51:04 | Global Integration of Common Lines |
| 53:09 | Integral Operator on SO(3) |
| 56:18 | Convolution and Fourier Transform on SO(3) |
| 57:35 | Spectrum: Semi-Circle |
| 58:10 | Spectrum: Spherical Harmonics |
| 58:24 | Reconstruction (1) |
| 58:37 | Reconstruction (2) |
| 58:47 | Groups |
| 59:54 | Thank You!, Questions |
| 61:24 | Convolution and Fourier Transform on SO(3) |
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