Identification of functional modules based on transcriptional regulation structure

author: Etienne Birmelé, Universite’ d’Evry

You might be experiencing some problems with Your Video player.

*Slides*
0:00	Identification of functional modules based on transcriptional regulation structure
1:01	Introduction
3:02	Outline
3:11	Learning the regulation structure
3:14	General overview
4:18	Regulation model
7:20	Licorn Step 1: Frequent co-regulator sets
8:03	General overview
8:37	Licorn Step 1: Frequent co-regulator sets
10:21	Regulation model
10:44	Licorn Step 2: best putative GRN’s
11:23	Regulation model
11:39	Licorn Step 3 - Statistical significance
12:16	Summary of the regulation structure learning step
12:55	Clustering
13:07	The three steps to detect modules
13:49	The similarity measure
16:03	The clustering algorithm
16:55	The similarity measure
17:19	The score of a clustering - 1
18:17	The score of a clustering - 2
18:46	Summary of the clustering step
19:10	Application to Yeast
19:12	The data set
20:01	Mapping to GO terms - 1
20:32	Mapping to GO terms - 2
21:33	Perspectives
22:54	- Questions

Lecture rating

People found this lecture:
Worth seeing
because it is:
Valuable and informative
Well presented
Easily understandable
Acceptably recorded
You need to login to cast your vote.

Report a problem or upload files

If you have found a problem with this lecture or would like to send us extra material, articles, exercises, etc., please use our ticket system to describe your request and upload the data.
Enter your e-mail into the 'Cc' field, and we will keep you updated with your request's status.