event thumbnail image
The 5th International Workshop on Mining and Learning with Graphs
Pascal

ProbLog and its Application to Link Mining in Biological Networks

author: Luc De Raedt, Katholieke Universiteit Leuven

Description

ProbLog is a recently introduced probabilistic extension of Prolog [De Raedt, Kimmig, Toivonen, IJCAI 07]. A ProbLog program defines a distribution over logic programs by specifying for each clause the probability that it belongs to a randomly sampled program, and these probabilities are mutually independent. The semantics of ProbLog is then defined by the success probability of a query in a randomly sampled program. It has been applied to link mining and discovery in a large biological network. In the talk, I will also discuss various learning settings for ProbLog and link mining, in particular, I shall present techniques for probabilistic local pattern mining, probabilistic explanation based learning [Kimmig, De Raedt, Toivonen, ECML 07] and theory compression from examples [De Raedt et al, ILP 96]. This is joint work with Angelika Kimmig, Hannu Toivonen, Kate Revoredo and Kristian Kersting.

You might be experiencing some problems with Your Video player.
Slides
0:00 ProbLog: A Probabilistic Prolog and Its Applications to Link
0:33 Overview - part 1
1:09 Overview - part 2
2:06 Motivation
2:09 Daughter in Florence
3:07 A model
4:36 Questions to ask
7:08 Biological Motivation
7:56 Database Information
9:45 Subgraph Extracted
10:20 Questions to ask
11:47 ProbLog: Semantics and Inference
12:09 ProbLog Programs
13:35 In ProbLog
14:12 Semantics ProbLog
16:10 ProbLog Evaluation
18:13 SLD-tree
18:27 ProbLog Evaluation
19:23 Disjoint Sum
20:09 Exact Inference
21:50 Binary Decision Diagrams
23:42 Probability BDD
24:18 Approximative Inference
24:41 Monte Carlo
25:38 Bounded Inference
26:24 ProbLog Evaluation
27:50 Bounded Inference
28:25 Bounds
28:43 Experimental data
29:55 Some results
30:49 Scalability
32:01 Current trends
33:40 Inference
35:04 Probabilistic EBL
35:08 Explanation-Based Learning
36:22 EBL
36:58 The CUP example
37:15 The CUP Example (2)
37:31 The CUP example
38:41 Most Likely Proof - part 1
39:49 Most Likely Proof - part 2
40:36 The CUP example
41:02 PEBL
41:52 Obtained explanations
41:52 Example EBL
42:45 PEBL Issues
43:12 Similarity-based EBL
44:31 PEBL Issues
45:35 Experiments - part 1
45:52 Experiments - part 2
47:40 Experiments - part 1
49:14 Similarity-based EBL
49:17 PEBL Issues
49:23 Obtained explanations
49:35 Experiments - part 1
49:37 Experiments - part 2
49:39 Results
50:50 Experiments - part 2
51:05 Results
52:27 Common explanations
53:27 PEBL: conclusions
54:28 Compression
54:35 Map for Daughter
54:47 Biology
55:22 Example
55:36 Revision
55:59 Revision
56:50 Experiment
56:53 Experiments
56:55 Compression
57:04 Conclusions

Lecture rating

People found this lecture:
Worth seeing
because it is:
 Valuable and informative
Well presented
Easily understandable
Acceptably recorded
You need to login to cast your vote.

Report a problem or upload files

If you have found a problem with this lecture or would like to send us extra material, articles, exercises, etc., please use our ticket system to describe your request and upload the data.
Enter your e-mail into the 'Cc' field, and we will keep you updated with your request's status.

Link this page

Would you like to put a link to this lecture on your homepage?
Go ahead! Copy the HTML snippet !

Write your own review or comment: