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Extensions to MDL denoising

author: Janne Ojanen, Department of Biomedical Engineering and Computational Science, Helsinki University of Technology

Description

The minimum description length principle in wavelet denoising can be extended from the standard linear-quadratic setting in several ways. We describe briefly three extensions: soft thresholding, histogram modeling and a multicomponent approach. The MDL hard thresholding approach based on the normalized maximum likelihood universal modeling can be extended to include soft thresholding shrinkage, which can be considered to give better results in some applications. In MDL histogram denoising approach the assumptions of the parametric density models for the data can be relaxed. The informative and noise components of the data are modeled with equal bin width histograms. The method can cope with different noise distributions. In multicomponent approach more than one non-noise components are included in the model, because it is possible that in addition to the random noise there may be other disturbing signal elements, or that the informative signal is comprised of several different components which we may want to observe, separate or remove. In these cases adding informative components in the model may result result in better performance than in the NML denoising approach.

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Slides
0:00 Recent Breakthroughs in Minimum Description Length Learning
0:47 Outline
1:06 Wavelet denoising (1)
2:43 Wavelet denoising (2)
2:48 Wavelet denoising (1)
2:55 Wavelet denoising (2)
3:26 Wavelet denoising: thresholding
5:34 MDL denoising
6:59 Soft thresholding and MDL (1)
9:24 Soft thresholding and MDL (2)
11:06 Soft thresholding: example results
11:39 Soft thresholding: conclusions
12:09 Histogram denoising
13:14 Code length for a histogram
14:21 Histogram denoising: algorithm idea
15:29 Histogram denoising: example results
16:04 Histogram denoising: discussion
16:26 Multicomponent denoising
19:00 Multicomponent denoising: 3-component model
19:39 Multicomponent denoising criterion (1)
19:44 Multicomponent denoising criterion (2)
20:34 Example: 3-component results capillary electrophoresis signal
21:12 Example: original MDL and the 3-component MDL denoising results plotted over CE data.
21:53 Conclusions

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