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A comparison of hypothesis testing methods for ODE models of biochemical systems

Published on Sep 07, 20074806 Views

In this talk we present a comparison of different methods of testing alternative hypotheses expressed using ODE models of biochemical systems. We investigated applicability, limitations and stabilit

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Chapter list

A Comparison of Hypotheses Testing Methods for ODE Models of Biochemical Systems00:00
Uncertainty - part 100:12
Uncertainty - part 200:27
Uncertainty - part 300:29
Noisy Data - part 100:33
Noisy Data - part 200:56
Noisy Data - part 301:10
Noisy Data - part 401:21
Problems With the “Best Fit” Approach01:40
Bayesian Hypotheses Testing - part 102:19
Bayesian Hypotheses Testing - part 202:40
Bayesian Hypotheses Testing - part 302:56
Marginal Likelihood Estimators - part 103:06
Marginal Likelihood Estimators - part 203:12
Marginal Likelihood Estimators - part 303:25
Marginal Likelihood Estimators - part 403:26
Marginal Likelihood Estimators - part 503:56
Marginal Likelihood Estimators - part 603:57
Marginal Likelihood Estimators - part 704:11
Marginal Likelihood Estimators - part 804:16
Marginal Likelihood Estimators - part 904:28
Models - part 104:36
Models - part 204:52
Models - part 305:15
Models - part 405:29
Models - part 505:51
Data06:06
Prior Arithmetic Mean - part 106:47
Prior Arithmetic Mean - part 207:08
Posterior Harmonic Mean - part 108:05
Posterior Harmonic Mean - part 208:47
Posterior Harmonic Mean - part 309:08
Posterior Harmonic Mean - part 409:10
Posterior Harmonic Mean - part 509:19
Posterior Harmonic Mean - part 609:22
Posterior Harmonic Mean - part 709:30
Annealed Importance Sampling - part 109:59
Annealed Importance Sampling - part 211:02
Annealed Importance Sampling - part 311:04
Annealed Importance Sampling - part 411:04
Annealed Importance Sampling - part 511:05
Annealed Importance Sampling - part 611:06
Annealing-Melting Integration - part 111:11
Annealing-Melting Integration - part 211:35
Annealing-Melting Integration - part 311:54
Annealing-Melting Integration - part 411:57
Annealing-Melting Integration - part 511:57
Annealing-Melting Integration - part 611:58
Annealing-Melting Integration - part 711:59
Standard Deviation of the Estimates12:00
Model Ranking - part 115:30
Model Ranking - part 216:04
Model Ranking - part 316:08
Model Ranking - part 416:10
Model Ranking - part 516:12
Conclusions - part 116:19
Conclusions - part 217:22
Future Developments17:45
Acknowledgements18:09