NIPS Workshop on Machine Learning in Computational Biology, Whistler 2008

NIPS Workshop on Machine Learning in Computational Biology, Whistler 2008

11 Videos · Dec 12, 2008

About

The field of computational biology has seen dramatic growth over the past few years, both in terms of new available data, new scientific questions, and new challenges for learning and inference. In particular, biological data is often relationally structured and highly diverse, well-suited to approaches that combine multiple weak evidence from heterogeneous sources. These data may include sequenced genomes of a variety of organisms, gene expression data from multiple technologies, protein expression data, protein sequence and 3D structural data, protein interactions, gene ontology and pathway databases, genetic variation data (such as SNPs), and an enormous amount of textual data in the biological and medical literature. New types of scientific and clinical problems require the development of novel supervised and unsupervised learning methods that can use these growing resources.

The goal of this workshop is to present emerging problems and machine learning techniques in computational biology. We invited several speakers from the biology/bioinformatics community who will present current research problems in bioinformatics, and we invite contributed talks on novel learning approaches in computational biology. We encourage contributions describing either progress on new bioinformatics problems or work on established problems using methods that are substantially different from standard approaches. Kernel methods, graphical models, feature selection and other techniques applied to relevant bioinformatics problems would all be appropriate for the workshop.

More information about the workshop can be found here.

Videos

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25:36

On the relationship between DNA periodicity and local chromatin structure

Sheila M. Reynolds

Dec 20, 2008

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3257 views

Draft
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28:22

Inside the black box: Identifying causal genetic factors of drug resistance

Bo-Juen Chen

Dec 20, 2008

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48 views

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20:50

Full Bayesian Survival Models for Analyzing Human Breast Tumors

Volker Roth

Dec 20, 2008

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4918 views

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24:32

Approximate Substructure Matching for Biological Sequence Classification

Vladimir Pavlovic

Dec 20, 2008

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3481 views

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20:58

Probabilistic assignment of formulas to mass peaks in metabolomics experiments

Simon Rogers

Dec 20, 2008

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3022 views

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27:44

Switching Regulatory Models of Cellular Stress Response

Guido Sanguinetti

Dec 20, 2008

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3232 views

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23:01

Learning Temporal Sequence of Biological Networks

Le Song

Dec 20, 2008

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3835 views

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24:34

Detecting the Presence and Absence of Causal Relationships Between Expression o...

Eun Yong Kang

Dec 20, 2008

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3620 views

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21:44

Predicting Binding Affinities of MHC Class II Epitopes Across Alleles

Nico Pfeifer

Dec 20, 2008

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3887 views

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28:29

Learning “graph-mer” motifs that predict gene expression trajectories in develo...

Christina Leslie

Dec 20, 2008

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3029 views

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23:01

KIRMES: Kernel-based Identification of Regulatory Modules in Euchromatic Sequen...

Sebastian J. Schultheiss

Dec 20, 2008

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2730 views